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Brain Atlases

Labeled saggital sections
Shown here are the 11 standard sagittal slices that make up our P7 mouse brain atlas with the 15 major anatomical regions shown. These standard slices were selected to best match those defined in Valverde's atlas of the postnatal mouse brain.


P 7 - 01 P 7 - 02 P 7 - 03 P 7 - 04 P 7 - 05 P 7 - 06
P 7 - 07 P 7 - 08 P 7 - 09 P 7 - 10 P 7 - 11
Brain atlases
Here are the corresponding atlases at each saggital section represented as subdivision meshes.

P 7 - 01 P 7 - 02 P 7 - 03 P 7 - 04 P 7 - 05 P 7 - 06
P 7 - 07 P 7 - 08 P 7 - 09 P 7 - 10 P 7 - 11
Interactive demo
Here is a demo program that allows you to manipulate an atlas over a saggital section. You may move the vertices of the subdivision-based mesh (shown as black squares) by holding-and-dragging your mouse. You may also increase or decrease the refinement level of the atlas by increasing or decreasing the subdivision level.
3D structures


Comments or suggestions: taoju (at) cs.wustl.edu